BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029C03SP1|AL429028
(861 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig599 1701 0.0
>3x_Contig599
Length = 2603
Score = 1701 bits (857), Expect = 0.0
Identities = 859/861 (99%)
Strand = Plus / Plus
Query: 1 atcctgacaatgatttgggtctgaggacccctctaaaccagatgaagcggacggactcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 985 atcctgacaatgatttgggtctgaggacccctctaaaccagatgaagcggacggactcat 1044
Query: 61 tagtacggggcaacagacgcccactagctagcaaagataataacaggacgcaatctatac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1045 tagtacggggcaacagacgcccactagctagcaaagataataacaggacgcaatctatac 1104
Query: 121 taagtgtgaagaataatgctgcgttgggaaagagtgatcaccctttaaaaaggcccgcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1105 taagtgtgaagaataatgctgcgttgggaaagagtgatcaccctttaaaaaggcccgcca 1164
Query: 181 gtagctttatgaagaatatgcctgamaataaactgaagaaatacggaagtgtcctgggga 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1165 gtagctttatgaagaatatgcctgaaaataaactgaagaaatacggaagtgtcctgggga 1224
Query: 241 tgaacacttttatgccacgaacgaagtcattggtgctgaaagatacagagctaaatgaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1225 tgaacacttttatgccacgaacgaagtcattggtgctgaaagatacagagctaaatgaaa 1284
Query: 301 agaatgacgacgaagatgaggaggatgaggaggatgatttacccatatttcccagcggaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1285 agaatgacgacgaagatgaggaggatgaggaggatgatttacccatatttcccagcggaa 1344
Query: 361 aatcgttaaaccttgggtttggcaacggattaamagcccttatcagagagaaagaagatg 420
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1345 aatcgttaaaccttgggtttggcaacggattaaaagcccttatcagagagaaagaagatg 1404
Query: 421 aactaaacattgagtatgcacccaagagacaaaaagaactaccgtatatacctaatgggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1405 aactaaacattgagtatgcacccaagagacaaaaagaactaccgtatatacctaatgggt 1464
Query: 481 acgacccctttgataaggaatccatcgagaaacttcagcatcatagatctccattccagg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1465 acgacccctttgataaggaatccatcgagaaacttcagcatcatagatctccattccagg 1524
Query: 541 ttgaatcaataacgtttgatacagaagaaagagatccagaacttataagtttagctgcta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1525 ttgaatcaataacgtttgatacagaagaaagagatccagaacttataagtttagctgcta 1584
Query: 601 cagatgaagatctcgtttcccctaccaggtataacaatcacaagcacaatctagaactgg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1585 cagatgaagatctcgtttcccctaccaggtataacaatcacaagcacaatctagaactgg 1644
Query: 661 attctgataatgaaagcataacaatcgaacttggtgaggaatataacggacaaggattgg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1645 attctgataatgaaagcataacaatcgaacttggtgaggaatataacggacaaggattgg 1704
Query: 721 atacgctagaattaaattccttattagattaacgggtactataatgctgcagatgtatta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1705 atacgctagaattaaattccttattagattaacgggtactataatgctgcagatgtatta 1764
Query: 781 tatcatgtaataaatagttcaagaggtatattttttcatgttatccgtggagagtggatc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1765 tatcatgtaataaatagttcaagaggtatattttttcatgttatccgtggagagtggatc 1824
Query: 841 agtatgcaagtcattggggtt 861
|||||||||||||||||||||
Sbjct: 1825 agtatgcaagtcattggggtt 1845
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6381
Number of Sequences: 1807
Number of extensions: 6381
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 861
length of database: 10,358,551
effective HSP length: 16
effective length of query: 845
effective length of database: 10,329,639
effective search space: 8728544955
effective search space used: 8728544955
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)